FastSemSim library

The FastSemSim Python package implements

  • a set of classes to represent and reason with ontologies (e.g. Gene Ontology)
  • a set of classes to represent and reason on ACs
  • the algorithms to calculate semantic similarity measures

Ontologies

Algorithms and data structure to parse and represent ontologies, and exctract information from them.

Annotation Corpora (ACs)

Algorithms and data structure to parse and represent ACs, and exctract information from them.